entity_management.morphology

Experimental morphologies entities

Classes

CutPlane(*[, name, description, ...])	Cut plane.
LabeledCell(*[, name, description, ...])	Labeled cell.
Morphology(*[, name, description, ...])	A Morphology.
NeuronMorphology(*[, name, description, ...])	A Neuron Morphology.
ReconstructedCell(*[, name, description, ...])	Reconstructed cell.
ReconstructedNeuronMorphology(*[, name, ...])	A reconstruced neuron morphology.
ReconstructedPatchedCell(*[, name, ...])	Reconstructed patched cell.
ReconstructedWholeBrainCell(*[, name, ...])	Reconstructed wholeBrain cell.
SynthesizedNeuronMorphology(*[, name, ...])	A synthesized neuron morphology.

class entity_management.morphology.CutPlane(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None, morphology)

Bases: MultiDistributionEntity

Cut plane.

class entity_management.morphology.LabeledCell(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None)

Bases: MultiDistributionEntity

Labeled cell.

class entity_management.morphology.Morphology(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None, objectOfStudy=None, brainLocation=None)

Bases: MultiDistributionEntity

A Morphology.

class entity_management.morphology.NeuronMorphology(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None, objectOfStudy=None, brainLocation=None)

Bases: Morphology

A Neuron Morphology.

class entity_management.morphology.ReconstructedCell(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None)

Bases: MultiDistributionEntity

Reconstructed cell.

Parameters:

name (str) – Name of the reconstructed cell.

class entity_management.morphology.ReconstructedNeuronMorphology(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None, objectOfStudy=None, brainLocation=None)

Bases: NeuronMorphology

A reconstruced neuron morphology.

class entity_management.morphology.ReconstructedPatchedCell(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None)

Bases: ReconstructedCell

Reconstructed patched cell.

Parameters:

name (str) – Name of the reconstructed patched cell.

class entity_management.morphology.ReconstructedWholeBrainCell(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None)

Bases: ReconstructedCell

Reconstructed wholeBrain cell.

class entity_management.morphology.SynthesizedNeuronMorphology(*, name=None, description=None, wasAttributedTo=None, wasGeneratedBy=None, wasDerivedFrom=None, dateCreated=None, contribution=None, distribution=None, objectOfStudy=None, brainLocation=None)

Bases: NeuronMorphology

A synthesized neuron morphology.